AT2G33080.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.499 extracellular 0.492 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : receptor like protein 28 | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
receptor like protein 28 (RLP28); INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: stem, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 24 (TAIR:AT2G33020.1); Has 103918 Blast hits to 29475 proteins in 1146 species: Archae - 25; Bacteria - 8021; Metazoa - 21584; Fungi - 926; Plants - 65955; Viruses - 28; Other Eukaryotes - 7379 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:14032015..14034237 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 83142.10 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.56 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.10 | ||||||||||||||||||||||||||||||||||||
| Length | 740 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSGSHLRLRF LSLLLLCCVS SSTSSLFTFS YPVLDLVACR SHQIQAFTQF KNEFDTHRCN HSDHSNGVWC DNSTGVVTKL QLNACLSGTL NPNSSLFWFH 101: QLRFLNLSHN NFTSTSFPSE FGNLNKVEVL DLSFNSFTGQ VPSSFSNLSQ LTELHLSNNQ LTGGFPQVQN LTNLSHLDFE NNKFSGTVPS SLLMMPFLSY 201: LNLYGNHFTG SIEVSTSSKL EILYLGLKPF EGQILEPISK LINLKRLELS FLNISYPLDL NLFSSLKSLT YLDLSGNSIS PRSLRSDLYI PLTLEKLLLE 301: QCGIIEFPNI LKTLQKLEYI DMSNNRINGK IPEWLWRLPR LRSMSLANNS FNGFEGSTDV LVNSSMEILF MHSNNIQGAL PNLPLSIKAF SAGYNNFSGE 401: IPLSICNRSS LAALSLPYNN FTGKIPQCLS NLTFVHLRKN NLEGSIPDTL CAGDSLQTLD IGFNLISGTL PRSLLNCSSL EFLSVDNNRI KDTFPFWLKA 501: LPNLQVLILS SNKLYGPIAP PHQSPLAFPE LRIFEIADNM FTGTLSPRYF VNWKTSSLTV NEDGDLYMVY KNNAFGIDSY VYRDTIDMKY KGLSMEQQMV 601: LNSYSAIDFS GNRLEGQIPK SIGLLKELIA LNLSNNAFTC HIPLSLANAT ELESLDLSRN QLSGTIPNGL KTLSFLAYIN VSHNKLKGEN HKEHRLLGNI 701: NPPLKGMQGF VVFLWRKLAL ERMRRQHNNL RKKTKNRSKC |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)