AT2G33060.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.997 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : receptor like protein 27 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
receptor like protein 27 (RLP27); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 26 (TAIR:AT2G33050.1); Has 94044 Blast hits to 28897 proteins in 1114 species: Archae - 39; Bacteria - 8117; Metazoa - 22106; Fungi - 1067; Plants - 55976; Viruses - 24; Other Eukaryotes - 6715 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:14025661..14028087 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 90065.40 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.58 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.05 | ||||||||||||||||||||||||||||||||||||||||
| Length | 808 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLFFIKVFMK TILSVLLLFF IFASSFTLVV GLAGCRPDQI QALTQFKNEF DSSDCNQTDY FNGVQCDNKT GVVTKLQLPS GCLHGSMKPN SSLFGLQHLR 101: YLNLSNNNFT SASLPSGFGN LNRLEVLYLS SNGFLGQVPS SFSNLSQLNI LDLSHNELTG SFPFVQNLTK LSILVLSYNH FSGTIPSSLL TLPFLSSLDL 201: RENYLTGSIE APNSSTSSRL EFMYLGNNHF EGQILEPISK LINLKHLDLS FLKTSYPIDL NLFSSFKSLV RLVLSGNSLL ATSITSDSKI PLNLENLVLL 301: SCGLIEFPTI LKNLTKLEHI DLSNNKIKGK VPEWFWNLPR LRRVNLFNNL FTDLEGSEEV LVNSSVRLLD LAYNHFRGPF PKPPLSINLL SAWNNSFTGN 401: IPLETCNRSS LAILDLSYNN LTGPIPRCLS DFQESLIVVN LRKNNLEGSL PDIFSDGALL RTLDVGYNQL TGKLPRSLLN CSMLRFVSVD HNKIKDTFPF 501: WLKALPDLQA LTLRSNKFHG PISPPDRGPL AFPKLRILEI SDNNFTGSLP PNYFVNWEAS SLQMNEDGRI YMGDYNNPYY IYEDTVDLQY KGLFMEQGKV 601: LTSYATIDFS GNKLEGQIPE SIGLLKALIA LNLSNNAFTG HIPLSLANVT ELESLDLSRN QLSGTIPNGL KTLSFLAYIS VAHNQLIGEI PQGTQITGQS 701: KSSFEGNAGL CGLPLQGSCF APPTPQPKEE DEDEEVLNWK AVVIGYWPGL LLGLIMAHVI ASFKPKWLVK IVGPEKRKED NPVRLFMTLD SRWDSFNNKK 801: NVEQKSDM |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)