AT2G33050.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.929 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : receptor like protein 26 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
receptor like protein 26 (RLP26); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction, defense response; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 27 (TAIR:AT2G33060.1); Has 88860 Blast hits to 27057 proteins in 1064 species: Archae - 42; Bacteria - 6823; Metazoa - 17702; Fungi - 879; Plants - 56754; Viruses - 16; Other Eukaryotes - 6644 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:14021870..14024272 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 89121.90 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.52 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.03 | ||||||||||||||||||||||||||||||||||||||||
| Length | 800 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRLHFCSLLL LYCIVFVSSF LTTDALACLP DQIQALIQFK NEFESDGCNR SDYLNGVQCD NTTGAVTKLQ LPSGCFTGTL KPNSSLFELH QLRYLNLSHN 101: NFTSSSLPSE FSNLTRLEVL SLASSSFTGQ VPSSISNLIL LTHLNLSHNE LTGSFPPVRN LTKLSFLDLS YNQFSGAIPF DLLPTLPFLS YLDLKKNHLT 201: GSIDVPNSSS SSKLVRLSLG FNQFEGKIIE PISKLINLNH LELASLNISH PIDLRVFAPL KSLLVFDIRQ NRLLPASLSS DSEFPLSLIS LILIQCDIIE 301: FPNIFKTLQN LEHIDISNNL IKGKVPEWFW KLPRLSIANL VNNSLTGFEG SSEVLLNSSV QLLDFAYNSM TGAFPTPPLG SIYLSAWNNS FTGNIPLSIC 401: NRSSLIVLDL SYNKFTGPIP QCLSNLKVVN LRKNSLEGSI PDEFHSGAKT QTLDVGYNRL TGKLPKSLLN CSSLRFLSVD NNRIEDTFPF WLKALPNLHV 501: LTLRSNRFFG HLSPPDRGPL AFPELRILEL SDNSFTGSLP PNFFVNWKAS SPKINEDGRI YMGDYKNAYY IYEDTMDLQY KGLFMEQGKV LTFYSTIDFS 601: GNKLEGQIPE SIGLLKELIA LNLSNNAFTG HIPMSLANVT ELESLDLSRN QLSGNIPREL GSLSFLAYIS VAHNQLKGEI PQGPQFSGQA ESSFEGNVGL 701: CGLPLQGSCV APPTKYPKEE DEEEEEDEVI EWKAVFFGYW PGLLLGLVMA HVIASFKPKW FVKILGPAKG KQVDPVRLFM NLDSRWDSFN NKDTVEEEVI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)