AT2G33020.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.945 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : receptor like protein 24 | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
receptor like protein 24 (RLP24); FUNCTIONS IN: kinase activity; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: root, cultured cell; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 23 (TAIR:AT2G32680.1); Has 100923 Blast hits to 28307 proteins in 1116 species: Archae - 44; Bacteria - 8298; Metazoa - 20135; Fungi - 1042; Plants - 64031; Viruses - 17; Other Eukaryotes - 7356 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:14013874..14016516 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 95711.30 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.85 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.07 | ||||||||||||||||||||||||||||||||||||
| Length | 864 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKTVFKSLLL LHFLLLLLLC FVSPSSFFLL KVPVGGLVAC RLRQSQAFMQ FKDEFDTRHC NHSDDFNGVW CDNSTGAVTV LQLRDCLSGT LKSNSSLFGF 101: HQLRYLALNR NNFTSASLPS EFCNLNKLKL LSLFSNGFID LSHNDLMGSF PLVRNLGKLA VLDLSDNHFS GTLNPNNSLF ELHSLRYLNL AFNNISSSLP 201: SKFGNLNKLE VLSLSFNGFS GQCFPTISNL TRITQLYLHN NELTGSFPLV QNLTKLSFLG LSDNLFSGTI PSYLFTFPSL STLDLRENDL SGSIEVPNSS 301: TSSKLEIMYL GFNHLEGKIL EPISKLINLK RLDLSFLNTS YPIDLNLLSP LKSLSYLDFS GNSLSPASLS SSSYIPLSME SIVLSLCGIR EFPNILKHLQ 401: NLIHIDITSN QIKGKIPEWL WTLPQLSFVD ISNNSFNGFQ GSAEVFVNLS VRILMLDANN FEGALPTLPL SIIGFSAIHN SFTGEIPLSI CNRTSLTMVD 501: LSYNNFTGPI PQCLSNFMFV NLRKNDLEGS IPDTFYTDSS LKSLDVGYNR LTGKLPRSLL NCSSLRFLSV DNNRVKDTFP FWLKALPNLR VLTLRSNKFY 601: GPISPPHQGP LGFPELRIFE IADNMFTGSL PPSFFVNWKA SALTKNEDGG LYMVYEYDKA ANSPVRYTYT DTIDLQYKGL HMEQERVLTS YAAIDFSGNR 701: LQGQIPESIG LLKALIALNL SNNAFTGHIP LSFANLMNLE SLDMSGNQLS GTIPNGLGSL SFLVYISVAH NKLKGEIPQG TQITGQIKSS FEGNAGLCGL 801: PLQETCFDSS VPPIQPKQED EEKGEVINWK AVAIGYAPGL LFGLAIAHLI ASYKPEWLVK IIGF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)