AT2G32710.2
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
|||||||||
| Experimental Localisations and PPI |
|
||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||
| Description (TAIR10) | protein_coding : Cyclin-dependent kinase inhibitor family protein | ||||||||
| Curator Summary (TAIR10) |
Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI). A member of seven KRP genes found in Arabidopsis thaliana. Negative regulator of cell division. Expressed in actively dividing cells. | ||||||||
| Computational Description (TAIR10) |
Cyclin-dependent kinase inhibitor family protein; CONTAINS InterPro DOMAIN/s: Cyclin-dependent kinase inhibitor (InterPro:IPR003175), Cyclin-dependent kinase inhibitor, plant (InterPro:IPR016701); BEST Arabidopsis thaliana protein match is: inhibitor/interactor with cyclin-dependent kinase (TAIR:AT5G48820.1); Has 276 Blast hits to 276 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 53; Fungi - 4; Plants - 203; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). | ||||||||
| Protein Annotations |
|
||||||||
| Coordinates (TAIR10) | chr2:+:13873496..13875350 | ||||||||
| Molecular Weight (calculated) | 31721.20 Da | ||||||||
| IEP (calculated) | 10.21 | ||||||||
| GRAVY (calculated) | -1.02 | ||||||||
| Length | 286 amino acids | ||||||||
| Sequence (TAIR10) (BLAST) |
001: MGKYIRKSKI DGAGAGAGGG GGGGGGGESS IALMDVVSPS SSSSLGVLTR AKSLALQQQQ QRCLLQKPSS PSSLPPTSAS PNPPSKQKMK KKQQQMNDCG 101: SYLQLRSRRL QKKPPIVVIR STKRRKQQRR NETCGRNPNP RSNLDSIRGD GSRSDSVSES VVFGKDKDLI SEINKDPTFG QNFFDLEEEH TQRTTRESTP 201: CSLIRRPEIM TTPGSSTKLN ICVSESNQRE DSLSRSHRRR PTTPEMDEFF SGAEEEQQKQ FIEKYNFDPV NEQPLPGRFE WTKVDD |
||||||||
| See Also |
|
||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)