AT2G31910.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 0.970 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cation/H+ exchanger 21 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of Putative Na+/H+ antiporter family | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cation/H+ exchanger 21 (CHX21); FUNCTIONS IN: sodium:hydrogen antiporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, root, leaf, pollen tube; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 23 (TAIR:AT1G05580.1); Has 4644 Blast hits to 4628 proteins in 1402 species: Archae - 218; Bacteria - 3403; Metazoa - 0; Fungi - 114; Plants - 555; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:13571044..13574019 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 91987.40 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.31 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.26 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 832 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MADPAAESID ASSSRFGRVV CYNQTAMHGS NTISAAAPFF MTQLSVANLT YRILYYFLKP LCLPPFVAQI LCGLLFSPTV LGNNEVVLKL IFPYKYTMLL 101: ETFANLALVY NVFLLGLGLD LRMIKIKDIK PVIIAIVGLL AALLAGAGLY YLPSNGEADK ILAGCMYWSI AFGCTNFPDL ARILADLKLL RTDMGHTAMC 201: AAVVTDLCTW ILFIFGMAIF SKSGVRNEML PYSLASTIAF VLLCYFVIQP GVAWIFNNTV EGGQVGDTHV WYTLAGVIIC SLITEVCGVH SITGAFLFGL 301: SIPHDHIIRK MIEEKLHDFL SGMLMPLFYI ICGLRADIGY MNRTVSVGMM AVVTSASVMV KILSTMFCSI FLRIPLRDGL AIGALMNTKG TMALVILNAG 401: RDTKALDVIM YTHLTLAFLV MSMVVQPLLA IAYKPKKKLI FYKNRTIQKH KGESELCVLT CVHVLPNVSG ITNLLQLSNP TKKSPLNVFA IHLVELTGRT 501: TASLLIMNDE AKPKANFADR VRAESDQIAE MFTALEVNND GVMVQTITAV SPYATMDEDI CLLAEDKQAC FILLPYHKNM TSDGRLNEGN AVHAEINQNV 601: MSHAPCSVGI LVDRGMTTVR FESFMFQGET TKKEIAMLFL GGRDDREALA YAWRMVGQEM VQLTVVRFVP SQEALVSAGE AADEYEKDKH VDEESIYEFN 701: FKTMNDPSVT YVEKVVKNGQ ETITAILELE DNNSYDLYIV GRGYQVETPV TSGLTDWNST PDLGIIGDTL ISSNFTMQAS VLVVQQYSSA NRQTAENNNQ 801: EPVQGKAKTD HEATPFMEDE DDEVEHQYSM RR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)