AT2G30460.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 0.836 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Nucleotide/sugar transporter family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Nucleotide/sugar transporter family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G06890.2); Has 2820 Blast hits to 2813 proteins in 387 species: Archae - 4; Bacteria - 285; Metazoa - 660; Fungi - 411; Plants - 1167; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:12976449..12978489 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 38832.00 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.54 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.60 | ||||||||||||||||||||||||||||||||||||||||
| Length | 353 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSDAQKFQLG TIGALSLSVV SSVSIVICNK ALISTLGFTF ATTLTSWHLL VTFCSLHVAL WMKFFEHKPF DPRAVLGFGV LNGISIGLLN LSLGFNSVGF 101: YQMTKLAIIP CTVVLETIFF RKMFSRKIQF SLVILLLGVG IATVTDLQLN MLGSVLSLLA VITTCVAQIM TNTIQKKYKV SSTQLLYQSC PYQAITLFVT 201: GPFLDGLLTN QNVFAFKYTS QVVFFIVLSC LISVSVNFST FLVIGKTSPV TYQVLGHLKT CLVLAFGYLL LKDAFSWRNI LGILVAVIGM VLYSYYCTLE 301: TQQKATETST QLPQMDENEK DPLVSAENGS GLISDNGVQK QDPVWNSNKD FQA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)