AT2G30370.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.968 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : allergen-related | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a small, potentially secreted protein that acts as an inhibitor of stomatal production though likely not through direct interaction with the TMM receptor. It is homologous to known stomatal regulators EPF1 and EPF2. | ||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
CHALLAH (CHAL); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14723.1); Has 273 Blast hits to 271 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 273; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:12940577..12942167 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 25445.90 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 9.64 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.21 | ||||||||||||||||||||||||||||
| Length | 230 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGFERTSSSL SLLSSSLPSS LQPSENTRAK FSLFYLLLLF FVLCVIATFT ITPTSTSSPY NRNSNSGTLG NFYAKVRKLF IPLTLLRDLT ISDCDGMSRL 101: TGHAEMPCTP KEILSRRIGF SAHEDKDSTQ LLVRSPLVGP CLAYDLDRVE EGKSTVVIKK TRKIGDRSKE AELRRILRGL GSSPPRCSSK CGRCTPCKPV 201: HVPVPPGTPV TAEYYPEAWR CKCGNKLYMP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)