AT2G30070.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 0.628 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : potassium transporter 1 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a high affinity potassium transporter. | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
potassium transporter 1 (KT1); CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: Potassium transporter family protein (TAIR:AT5G14880.1); Has 3625 Blast hits to 3386 proteins in 1031 species: Archae - 13; Bacteria - 2398; Metazoa - 1; Fungi - 100; Plants - 989; Viruses - 4; Other Eukaryotes - 120 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:12835097..12838466 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 79131.30 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.49 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.48 | ||||||||||||||||||||||||||||||||||||||||
| Length | 712 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNQSPSLIEQ GISQQHLKTL SCANVLTLAY QSLGVIYGDL STSPLYVYKT TFSGKLSLHE DDEEIFGVFS FIFWTFTLIA LFKYVFIVLS ADDNGEGGTF 101: ALYSLLCRYA KLSILPNHQE MDEKLSTYAT GSPGETRQSA AVKSFFEKHP KSQKCLLLFV LLGTCMAIGD SVLTPTISVL SAVSGVKLKI PNLHENYVVI 201: IACIILVAIF SVQRYGTHRV AFIFAPISTA WLLSISSIGV YNTIKWNPRI VSALSPVYMY KFLRSTGVEG WVSLGGVVLS ITGVETMFAD LGHFSSLSIK 301: VAFSFFVYPC LILAYMGEAA FLSKHHEDIQ QSFYKAIPEP VFWPVFIVAT FAAVVGSQAV ISATFSIISQ CCALDCFPRV KIIHTSSKIH GQIYIPEVNW 401: MLMCLCLAVT IGLRDTNMMG HAYGLAVTSV MLVTTCLMTL VMTIVWKQRI ITVLAFVVFF GSIELLYFSS CVYKVPEGGW IPILLSLTFM AVMYIWNYGT 501: TKKHEFDVEN KVSMDRIVSL GPSIGMVRVP GIGLVYSNLV TGVPAVFGHF VTNLPAFHKI LVFVCVKSVQ VPYVGEEERF VISRVGPKEY GMFRSVVRYG 601: YRDVPREMYD FESRLVSAIV EFVETEPGLE EEEMSSVRRK KEECMEIMEA KEAGVAYILG HSYAKAKQSS SVLKKLAVNV VFAFMSTNCR GTDVVLNVPH 701: TSLLEVGMVY YV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)