AT2G29000.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G28960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:12460781..12465037 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 98090.50 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.82 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.24 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 872 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEGHRGLLLA LIVNIFSIVH LVHAQNPEGF ISLDCGLPAK ESPYTESTTS LVFTSDANFI SSGISTKLPK HDDYKPYNFL RYFPDGTRHC YDLSVKQGTN 101: YLIRASFVYG NYDGRNIMPR FDLYIGPNIW AVVSELDLYS PEEEIIHMTK STSLQICLVK TGPTTPFIST LELRPLRNDN YITQSGSLKL MQRMCMTETV 201: STLRYPDDVY DRLWYTDGIY ETKAVKTALS VNSTNPFELP QVIIRSAATP VNSSEPITVE YGGYSSGDQV YLYLHFAEIQ TLKASDNREF DIVWANNIKK 301: LAYKPKVSQI DTLLNTSPNK CDNTFCKAFL VRTQRSTLPP LLNAYEVYIL VEFPYSETHP DDVVAIKKIK AAYGLKIISW QGDPCLPREY KWEYIECSYT 401: NNSIPPRIIS LDLSNRGLKG IIEPVLQNLT QLEKLDLSIN RLSGEVPEFL ANMKSLSNIN LSWNNLKGLI PPALEEKRKN GLKLNTQGNQ NLCPGDECKR 501: SIPKFPVTTV VSISAILLTV VVLLIVFIYK KKKTSKVRHR LPITKSEILT KKRRFTYSEV EAVTNKFERV IGEGGFGIVY HGHLNDTEQV AVKLLSHSST 601: QGYKQFKAEV ELLLRVHHTN LVNLVGYCNE EDHLALVYEY AANGDLKQHL SGESSSAALN WASRLGIATE TAQGLEYLHI GCEPPMIHRD VKTTNILLDE 701: HFHAKLADFG LSRSFPVGVE SHVSTNVAGT PGYLDPEYYR TNWLTEKSDV YSMGIVLLEI ITNQPVIQQV REKPHIAEWV GLMLTKGDIK SIMDPKLNGE 801: YDSSSVWKAL ELAMSCVNPS SGGRPTMSQV ISELKECLIY ENSRKEGRSE VDSKSSIELS TSFTAEVTPD AR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)