AT2G28860.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 0.533 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : cytochrome P450, family 710, subfamily A, polypeptide 4 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
member of CYP710A | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
cytochrome P450, family 710, subfamily A, polypeptide 4 (CYP710A4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: root hair, root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 710, subfamily A, polypeptide 3 (TAIR:AT2G28850.1); Has 26515 Blast hits to 26466 proteins in 1471 species: Archae - 50; Bacteria - 2884; Metazoa - 10516; Fungi - 4738; Plants - 7451; Viruses - 0; Other Eukaryotes - 876 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr2:-:12388342..12389823 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 55693.20 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 7.55 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.04 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 493 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MVSSVSLFAS LTPYLVSALL LFLLLEQLFY RVKKRNLPGP LFVFPIIGNV VALIRDPTSF WDKQSAMADT SVGLSVNYLI GKFIIYIKDA ELSNKVLSNI 101: RPDAFQLTGH PFGKKLFGDH SLIFMFGEDH KSVRRQVAPN FTRKPLSAYS SLQQIVILRH LRQWEESFSS GSRPVSMRQL IRELNLETSQ TVFVGPYLDK 201: EVKKTICDDY SLLTLGTMAI PIDLPGFTFG EARQAVSRLV NTMSVCVGKS KAKMAAGENP TCLVDFWTHS IIEENPPPPH SKDKEISCVL VDFMFASQDA 301: STSSLLWAVV MLESEPEVLR RVREDVARFW SSESNELITA DQLAEMKYTR AVAREVLRYR PPASMIPHVA VSDFRLTESY TIPKGTIVFP SLFDASFQGF 401: TEPDRFDPDR FSETRQEDEV FKRNFLTFGN GSHQCVGQRY AMNHLVLFIA MFSSMFDFKR VRSDGCDDIV HIPTMSPKDG CTVFLSSRLV TSP |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)