AT2G28850.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.533 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 710, subfamily A, polypeptide 3 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of CYP710A | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 710, subfamily A, polypeptide 3 (CYP710A3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: stem, petal, root cap of the primary root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 710, subfamily A, polypeptide 4 (TAIR:AT2G28860.1); Has 27180 Blast hits to 27131 proteins in 1508 species: Archae - 46; Bacteria - 3035; Metazoa - 10578; Fungi - 5082; Plants - 7553; Viruses - 0; Other Eukaryotes - 886 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:12383480..12384961 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 55877.40 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.13 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.05 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 493 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVSSVSLFAS LTPYLVSALL LFLLLEQLFY RLKKRNLPGP LFVFPIIGNV VALIRDPTSF WDKQSAMADT SVGLSVNYLI GKFIIYIKDA ELSNKVFSNI 101: RPDAFQLVGH PFGKKLFGDH SLIFMFGENH KSVRRQVAPN FTRKPLSAYS SLQQIVILRH LRQWEESFSS GSRPVSMRQL IRELNLETSQ TVFVGPYLDK 201: EVKNTIRDDY NVFNPGTMAL PIDLPGFTFG EARRAVSRLV NTMSLCVRKS KEKMAAGENP TCLVDFWTHS IVAESPPPPH SKDEEISCVL VDFLFASQDA 301: STSSLLWAVV LLESEPEVLR RVREDVARFW SPESKESITA DQLAEMKYIR AVAREVLRYR PPASMVPHVA VSDFRLTESY TIPKGTIVFP SLFDASFQGF 401: TEPDRFDPDR FSETRQEDEV FKRNFLTFGI GSHQCVGQRY ALNHLVLFIA MFSSMFDFKR VRSDGCDEIV HIPTMSPKDG CTVFLSSRLV TSP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)