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AT2G28170.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
vacuole 0.857
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : Cation/hydrogen exchanger family protein
Curator
Summary (TAIR10)
member of Putative Na+/H+ antiporter family
Computational
Description (TAIR10)
ATCHX7; FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, pollen tube; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 6A (TAIR:AT1G08140.1); Has 762 Blast hits to 743 proteins in 145 species: Archae - 8; Bacteria - 146; Metazoa - 0; Fungi - 90; Plants - 510; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0475eggNOG:KOG1650EMBL:AC005851EMBL:CP002685
EnsemblPlants:AT2G28170EnsemblPlants:AT2G28170.1entrez:817363GeneID:817363
Genevisible:Q9ZUV9GO:GO:0006813GO:GO:0015299GO:GO:0016021
Gramene:AT2G28170.1hmmpanther:PTHR32468hmmpanther:PTHR32468:SF17HOGENOM:HOG000091141
InParanoid:Q9ZUV9InterPro:IPR006153KEGG:ath:AT2G28170OMA:WAGHENG
PaxDb:Q9ZUV9Pfam:PF00999Pfam:Q9ZUV9PhylomeDB:Q9ZUV9
PIR:F84681PRIDE:Q9ZUV9PRO:PR:Q9ZUV9ProteinModelPortal:Q9ZUV9
Proteomes:UP000006548RefSeq:NP_180384.2STRING:3702.AT2G28170.1TAIR:AT2G28170
tair10-symbols:ATCHX7tair10-symbols:CHX7TMHMM:TMhelixUniGene:At.52947
UniProt:Q9ZUV9
Coordinates (TAIR10) chr2:-:12006371..12009956
Molecular Weight (calculated) 90994.90 Da
IEP (calculated) 7.59
GRAVY (calculated) 0.26
Length 801 amino acids
Sequence (TAIR10)
(BLAST)
001: MDPFNASWWT NMAWHGYSLS EDGTKFCEML PTKINSFGLS EKILHKSVGL YFWEYPLPNL ELIILSVFFF WQFFEILFKM SNIPIPKMPS MMLGCVVINL
101: FSYTRPGSLL HRMFFPDDGR PKVAETGGAF GFVMYWFLKG VSIDVGMLRK TEPRAALIGF NTLVIPYISG YILMRTRKHF GKLAMTELQY QEIILLQSLS
201: SFAGVNGLLT DLKINHSEFG RMVQSCAAVT DLVIFIMVSG TVLLKGQKGL PHGIVIVLVI GFLVYIVWPV MLWIIKQTPE GRLVKDVYIY LVMATAYFVY
301: MFWLNFFQFS TYGWFIIGLA TPAGPPLGSA LIQRFECFNV GVLLPLFGSL SMEQLDISWL MREILNLKHM EGFAYEAISV ILIVTVVKFV VTAITAFAVR
401: IPYRDSIVLA MVLSNRSIFE LGYLGYIVEL KMFDNKSFTI AALSVLVSSL LTPIAIEFMY EPQHIFSSYR DRNMLTLKHD SKLKTLVCIH KPDHITSMVN
501: FVELFNPTQE SKLECNVLHL VELIGQAIPT FISHKMQKPK VGTRSCSRNV ITAFLSLRRH LTKEAISIDI FTSASLVEHM HEDLCWLALD KNVALVVLPF
601: HRSWSVDRST IVSDDKAMQN LNHKVLKRAS CSVGIFVYRK PLWESQMHGS CYKVCAIVVG GKDDKEALAF TNRMRRNKQT SVTILHLIPQ LTTEESEDSV
701: QKLDYDDIKE IMKTEDSNEN DSWICIEKSV KEGAETSVIL RSIAYDYDLF IVGRSSGMNS AVTKGLNEWT EFEELGALGD VIASKEFPSR ASVLVLQQQQ
801: Y
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)