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AT2G27160.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 0.553
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 13 Blast hits to 13 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
EMBL:CP002685EnsemblPlants:AT2G27160EnsemblPlants:AT2G27160.1entrez:817258
ExpressionAtlas:F4IFP2GeneID:817258Gramene:AT2G27160.1PRIDE:F4IFP2
ProteinModelPortal:F4IFP2Proteomes:UP000006548RefSeq:NP_180284.2SMR:F4IFP2
TAIR:AT2G27160UniGene:At.20239UniGene:At.64364UniProt:F4IFP2
Coordinates (TAIR10) chr2:-:11607582..11608166
Molecular Weight (calculated) 12026.70 Da
IEP (calculated) 8.66
GRAVY (calculated) 0.03
Length 108 amino acids
Sequence (TAIR10)
(BLAST)
001: MRNQCFNGSC LSNWPDSSCP DCRYSQAAGN LWAGFLPAGG TRKDVPEGIG RRKGIAIYLS LKQSVFGIML ATNMLTVVRA RMIVEAVNIL TVEWLMLSLT
101: ENWTRLEN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)