AT2G25630.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : beta glucosidase 14 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
beta glucosidase 14 (BGLU14); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: pollen tube growth; LOCATED IN: plant-type cell wall; EXPRESSED IN: stem, male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 13 (TAIR:AT5G44640.1); Has 11270 Blast hits to 10932 proteins in 1458 species: Archae - 142; Bacteria - 7740; Metazoa - 715; Fungi - 202; Plants - 1454; Viruses - 0; Other Eukaryotes - 1017 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:10908360..10909880 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 55012.20 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.71 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.37 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 489 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTSKYFSVLV FIILASNEVV AKRHSSTPKL RKTDFPEDFI FGAATSAYQV EGAAQEDGRG PSIWDTFSEK YPEKIKDGSN GSIADDSYHL YKEDVGLLHQ 101: IGFNAYRFSI SWSRILPRGN LKGGINQAGI DYYNNLINEL LSKGIKPFAT IFHWDTPQDL EDAYGGFRGA EIVNDFRDYA DICFKSFGDR VKHWITLNEP 201: LTVVQQGYVA GVMAPGRCSK FTNPNCTAGN GATEPYIVGH NLILAHGEAI KVYRKKYKAS QKGQVGIALN AGWNLPYTES AEDRLAAARA MAFTFDYFME 301: PLVTGKYPVD MVNNVKGGRL PTFTSKQSNM LKGSYDFIGI NYYSSSYAKD VPCSSENVTM FSDPCASVTG ERDGGIRDLI LYAKYKFKDP VMYITENGRD 401: EASTGKILLK DGDRIDYYAR HLKMVQDAIL IGANVKGFFA WSLLDNFEWA SGYTVRFGLV YVDFNDRRKR YLKKSAHWFR HLLNGKKEN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)