suba logo
AT2G25169.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
cytosol 0.568
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink).
Protein Annotations
EMBL:CP002685EnsemblPlants:AT2G25169EnsemblPlants:AT2G25169.1entrez:7922485
GeneID:7922485GO:GO:0016021Gramene:AT2G25169.1KEGG:ath:AT2G25169
PaxDb:F4IRK9Proteomes:UP000006548RefSeq:NP_001154533.1TAIR:AT2G25169
TMHMM:TMhelixUniGene:At.74680UniProt:F4IRK9
Coordinates (TAIR10) chr2:-:10712606..10714014
Molecular Weight (calculated) 14042.20 Da
IEP (calculated) 10.57
GRAVY (calculated) 0.10
Length 124 amino acids
Sequence (TAIR10)
(BLAST)
001: MKRSKLYKTQ TVSNSVCNEN LKERKRKIAR GRFNMLCLVS LFIMELKSLD VGSLLVGANY GEDFETRSYL WRRGAIEASN FLKPLLRPVV TTTSYSLLPP
101: LVTTSSSSLL PSLASSLFFI FFFS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)