AT2G25120.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 ASURE: nucleus What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Bromo-adjacent homology (BAH) domain-containing protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Bromo-adjacent homology (BAH) domain-containing protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Bromo adjacent homology (BAH) domain (InterPro:IPR001025); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G23120.1); Has 701 Blast hits to 656 proteins in 122 species: Archae - 0; Bacteria - 4; Metazoa - 109; Fungi - 97; Plants - 354; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:10689934..10691569 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 44795.40 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.27 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.90 | ||||||||||||||||||||||||||||||||
| Length | 380 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLTEKMNEAS QDEDNVALSN TKETEKKQRK RKKDCEEKNK KKRKKDCEEK HETKEMELAW KPEDCAKPLG EVSKVTGKGK KKKSHFKTFT FRGNQYALED 101: SVQLVPDDPN SKPYCAIIKD IYIPNKEKYV KLAVHWFYRP EDVDKKHVGK WESKDSRNLF YSFHRDEVFA ESVKHKCVVN FVPENKQIPN RREHPCFIVQ 201: NVYDFVKKKV RKFTDKNFDV HQKNEIDRLV AKTSLRLGDL PDIEKDQVTK TSKGKRTVQR KSPKTSTVYK SILEDFDLLT GDSDRDKRLG ELLEAVKHEC 301: RTSKKKGARD DDSYWPDDVV PVVRALEHVF YDSMAEDMSK YHHKLEILVD ELKVSLIPFT HPSYIFIFVL HVLDFYLFFC |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)