AT2G24190.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : NAD(P)-binding Rossmann-fold superfamily protein | ||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G61220.2); Has 72615 Blast hits to 72550 proteins in 3183 species: Archae - 711; Bacteria - 48651; Metazoa - 4595; Fungi - 3717; Plants - 2402; Viruses - 0; Other Eukaryotes - 12539 (source: NCBI BLink). | ||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:10283740..10284934 | ||||||||
| Molecular Weight (calculated) | 33299.00 Da | ||||||||
| IEP (calculated) | 5.49 | ||||||||
| GRAVY (calculated) | -0.15 | ||||||||
| Length | 301 amino acids | ||||||||
| Sequence (TAIR10) (BLAST) |
001: MAEESPSSGL CRYAIVTGGN RGIGFEICRQ LANKGIRVIL TSRDEKQGLE AVETLKKELE ISDQSIVFHQ LDVSDPVSVT SLAEFVKTHF GKLDILINNA 101: GVGGVITDVD ALRAGTGKEG FKWEETITET YELAEECIKI NYYGPKRMCE AFIPLLQLSD SPRIINVSSF MGQVKNLVNE WAKGILSDAE NLTEVRIDQV 201: INQLLNDLKE DTAKTKYWAK VMSAYVVSKA GLNAYTRILA KKHPEIRVNS VCPGFVKTDM NFKTGILSVE EGASSPVRLA LLPHQESPSG CFFDRKQVSE 301: F |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)