AT2G24140.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein of unknown function, DUF593 | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein of unknown function, DUF593; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT4G30830.1); Has 1121 Blast hits to 1059 proteins in 203 species: Archae - 5; Bacteria - 110; Metazoa - 379; Fungi - 69; Plants - 280; Viruses - 2; Other Eukaryotes - 276 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:10262752..10263653 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 31823.90 Da | ||||||||||||||||||||||||
| IEP (calculated) | 5.01 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.85 | ||||||||||||||||||||||||
| Length | 273 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSVILRLQGE KALLAMEASQ YKRMVEERMS HVELSMELLE DLNYQKEVEI KNLECDLHAY RCKLMSLGWS GLDDEDCIRF CDRSQTPSPE PNETVLVEKG 101: VIEQSLDSRR DHEKNLDLNW EKIKKVDEQL KELTDFRDSV RDQYKILKQE TTSVSETKNG EKGMCKPDLL VKKMSKKSLK QKRDKSIKRD QALGSCSAND 201: AEYQAELQRL RERVERLEQE RCNKEPAQTS GVSQENMNLQ RKSEEELSSM QSAMFSYDSA IVSVQEAMLY FWL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)