AT2G24000.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : serine carboxypeptidase-like 22 | ||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
serine carboxypeptidase-like 22 (scpl22); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G30610.1); Has 3944 Blast hits to 3014 proteins in 261 species: Archae - 0; Bacteria - 12; Metazoa - 725; Fungi - 882; Plants - 1918; Viruses - 0; Other Eukaryotes - 407 (source: NCBI BLink). | ||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:10209475..10214042 | ||||||||
| Molecular Weight (calculated) | 45780.90 Da | ||||||||
| IEP (calculated) | 7.30 | ||||||||
| GRAVY (calculated) | -0.44 | ||||||||
| Length | 401 amino acids | ||||||||
| Sequence (TAIR10) (BLAST) |
001: MARTHLLFLL FVLLSLATSS TSTKEQEEDR IKALPGQPKV GFSQFSGYVT VNESHGRSLF YWLTESSSHS PHTKPLLLWL NGGPGCSSIA YGASEEIGPF 101: RISKTGCNLY LNNFSWNTGH YVPQLAQKIH EYNNAYKNPV INLKGFMVGN PEMDKNNDRL GTITYWWSHA MISDASYNRI LKNCDFTADR FSKECDSAIY 201: VAAADFGDID QYSIYTPKCV PPQDQTNQTK FEQMMQMHTT KRFLEDQYDP CTENYAEIYY NRPEVQRAMH ANHTAIPYKW TACSDSVFNN WNWRDSDNSM 301: LPIYKELIAA GLRIWVYSGD TDSVIPVTAT RYSLGKLNLR VKTRWYPWYS GNQVGGRTEV YEGLTFVTVR GAGHEVPFFQ PQSALILLRS FLAGNELSRS 401: Y |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)