AT2G23970.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Class I glutamine amidotransferase-like superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Class I glutamine amidotransferase-like superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase type 1 (InterPro:IPR017926); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT4G30550.1); Has 5842 Blast hits to 5842 proteins in 1417 species: Archae - 309; Bacteria - 2944; Metazoa - 13; Fungi - 191; Plants - 97; Viruses - 3; Other Eukaryotes - 2285 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:10199698..10201081 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 28313.90 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.21 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.32 | ||||||||||||||||||||||||||||||||||||||||
| Length | 251 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVNEQKRFAL FLATSDSTFV KKAYGGYFNV FVSTFGEDGE QWDLFRVIDG EFPDDKDLDK YDGFVISGSL NDAFGDDDWI VKLCSLCQKL DDMKKKVLGI 101: CFGHQILSRI KGGKVGRASR GLDMGLRSIT MVTDAVKPGG YFGSQIPKSL AIIKCHQDEV LELPESATLL AYSDKYNVEM CSYGNHLLGI QGHPEYNKEI 201: LFEIIDRVVN LKLMEQDFAD KAKATMENAE PDRKQWQTLC KNFLKGRSEQ V |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)