AT2G23530.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Zinc-finger domain of monoamine-oxidase A repressor R1 | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Zinc-finger domain of monoamine-oxidase A repressor R1; CONTAINS InterPro DOMAIN/s: Cell division cycle-associated protein (InterPro:IPR018866); BEST Arabidopsis thaliana protein match is: Zinc-finger domain of monoamine-oxidase A repressor R1 (TAIR:AT4G37110.1); Has 512 Blast hits to 506 proteins in 112 species: Archae - 0; Bacteria - 4; Metazoa - 144; Fungi - 73; Plants - 256; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:10020652..10022804 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 62249.10 Da | ||||||||||||||||||||||||
| IEP (calculated) | 5.83 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.88 | ||||||||||||||||||||||||
| Length | 552 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLTMRTEAQD SVPKSNPNPE LIKETPKVSL YEQCREERIK ENLQRMNNLG LLNLSRKLKP KTRPVKRSYG NRNSVQNPTP PLQPSRRSSR LENTTPVIYT 101: DGINEKGKKA SKRESVVIGE GIRAEIYTEE HEKLLGNTER SWTCFVDGYD KNGKRIYDPF NGKTCHQCRQ KTMGHRTQCS ECNLVQGQFC GDCLFMRYGE 201: HVLEALENPD WICPACRGIC NCSLCRNNKG WVPTGPIYRR IAALGYKSVA HYLIQTKRAP TDDTTPSQAS AKRSLSFQEK IAGDEDVPML ENDDSLQKEE 301: GENTNEDQNG DLPEEVQKVQ NMECQSGGSL KKEEDETPNS ARRSLSFLLP SVEDDQTSLV DVQVLSCLVP PKQEHSCAHN GDDLPDIQER IGQHSNLETK 401: PDSYLLHVDE QIPLVDVQVL SYLETPKQEH SCAHIGDGLP KIQEWIGQDP TSETKPVSYL IPIDDDQTSL VDAQVMYLET PKQDKQEHSC AHIGDDLPEI 501: QQGTGQDSNL ETRLGESQTL VVKARVTRSK RKAALEPNPD SIGGRLRQRR RT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)