AT2G22530.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Alkaline-phosphatase-like family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Alkaline-phosphatase-like family protein; FUNCTIONS IN: transferase activity, catalytic activity; INVOLVED IN: metabolic process, phospholipid biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase (InterPro:IPR002591), Alkaline-phosphatase-like, core domain (InterPro:IPR017850); BEST Arabidopsis thaliana protein match is: Alkaline-phosphatase-like family protein (TAIR:AT5G17250.1); Has 1578 Blast hits to 1403 proteins in 374 species: Archae - 4; Bacteria - 326; Metazoa - 515; Fungi - 456; Plants - 91; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:9572971..9577441 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 106153.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.21 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.36 | ||||||||||||||||||||||||||||||||||||
| Length | 958 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTTAAMTCTR LTIFTVAGIL LQIIGLSIFV FGFFPVKPTL SGVSGSESYR DPFCDSSLIS NESELHHPEK LRLLYQELSG ISSKYDRLIL MVIDGLPAEF 101: VLGKDGKPPE KVLKESMPYT QSLLANGDAI GYHAKAAPPT VTMPRLKAMV SGAIGGFLDV AFNFNTQALL DDNILGQFFR IGWKMVMLGD ETWLKLFPGL 201: FMRHDGVSSF FVKDTVQVDR NVSRHLPDEL NSDDWNLLIL HYLGLDHVGH TGGRNSPLMP AKLKEMDDIV RTMHLRAMMD RSHDQGQTLL IIVSDHGMTE 301: NGNHGGSSYE ETDSLMLFIG LNSNISDYAS ATNNVAFQVD LAPTLALLFG VPIPKNNVGV LVPGTLCSLR DFEQLRALEL NSWQLLRLML AQIQSSSFPR 401: VSCNCFLDGT CEGLDLDISE CSGDKEKQLI CLFRNAAALH GIWKSKKSTE SSSTMEDFSR ALDAYNTFLK TASEWLASKT TEKPVLLLGL GVSAMLLSCF 501: ICGTVFLSLF KEVYHEPKDR VCSLSNLLNL EEVFIFALLL ILVISMGSSS MVEEEHYIWH FMVSTFHLLL LFKTAKSFKI SKGMNILRDF KFGSIFSLLI 601: SGRLLRGWHQ GGVNWTYLPD ISKWLVQGGS GYVKWIQLIS IILVIGLGLY TLFRTGSNRK GVRILAFGFS TCGFLVLLHV GRYQDELSTG FGATVTVKVI 701: YYLLSISSIG ASLVLPWSAL NKDKSFLAEV GDCLYLIGSA YILCWCLLQQ LLQQPINSGP ILLLLLQILA ILCLSSSDFQ VNEWVEITAL YYMGMAGHFA 801: LGNSNTLATI DVAGAFIGIS SHSTILSGIL MFMITYASPM LFLLSLVMYI GANLRNHSNS TISTHRETSL GQILKLKLGF PCLVPLCINS ILLTAYTVVL 901: LLMRNHLFVW SVFSPKYLYV CATTLCTYIG VCIVAATVTY TFYVTTFLRS NRTRHNNS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)