AT2G21370.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : xylulose kinase-1 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Although this gene has a sequence similar to xylulose kinases, several lines of experimental evidence suggest that it does not act on xylulose or deoxy-xylulose. | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
xylulose kinase-1 (XK-1); FUNCTIONS IN: xylulokinase activity; INVOLVED IN: carbohydrate metabolic process, xylulose catabolic process; LOCATED IN: chloroplast, plastid, cytoplasm; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485); Has 5316 Blast hits to 5316 proteins in 1437 species: Archae - 25; Bacteria - 4700; Metazoa - 4; Fungi - 20; Plants - 53; Viruses - 0; Other Eukaryotes - 514 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:9137582..9140050 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 52470.50 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.79 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.24 | ||||||||||||||||||||||||||||||||||||||||
| Length | 478 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLILRQFQIS SFELFQSPKQ TGFYSSSRSV PLPRTRFYSD FRVMSGNKGT NYEKLYLGMD FGTSGGRFTV IDEQGEIKAQ GKREYPPFMK EESMGWASSW 101: KATLFSLLED IPVTVRSLVS SISLDGTSAT TLILNSESGE VLCQPYLYNQ SCPDALPEVK SIAPANHTVC SGTSTLCKLV SWWNTEVPNR ESAVLLHQAD 201: WLLWLLHGRL GVSDYNNALK VGYDPESESY PSWLLGQPYS QLLPKVQAPG TSIGNLKESF TRQFGFPDDC IVCTGTTDSI AAFLAARATE PGKAVTSLGS 301: TLAIKLLSTK RVDDARYGVY SHRLDDKWLV GGASNTGGAI LRQLFSDEQL ERLSQEINPM VGSPLDYYPL QSSGERFPIA DPNLAPRLLP RPESDVEFLH 401: GILESIARIE GKGYKLLKEL GATEAEEVLT AGGGAKNDKW IKIRQRVLGL PVKKAVHTEA SYGASLLALK GAKQNSGL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)