AT2G19530.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.586 What is SUBAcon? |
|||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||
| Computational Description (TAIR10) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55160.2); Has 461 Blast hits to 346 proteins in 80 species: Archae - 0; Bacteria - 16; Metazoa - 89; Fungi - 28; Plants - 57; Viruses - 0; Other Eukaryotes - 271 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||
| Coordinates (TAIR10) | chr2:+:8460219..8461486 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 23274.80 Da | ||||||||||||||||||||||||
| IEP (calculated) | 8.81 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.93 | ||||||||||||||||||||||||
| Length | 202 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MESSPSGSEP PQKVVSKLQK VGWRATMIFN LGFAAYIFAI KREKDIDADE KKKVKKGSEA RHKGVKKGAV NTEIEKKGAE ETDKAKEAET AIPEKEETKL 101: IPELDPLFEF TDATDQSMFQ TVATEHVKVA RKPIPEDEQK ELFKWILEEK RKIEPKDRKE KKQIDEEKAI LKQFIRAERI PKLLPDDSVD SSLRDWDKFF 201: SK |
||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)