AT2G19340.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Oligosaccharyltransferase complex/magnesium transporter family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Oligosaccharyltransferase complex/magnesium transporter family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharyltransferase complex/magnesium transporter (InterPro:IPR021149); BEST Arabidopsis thaliana protein match is: Oligosaccharyltransferase complex/magnesium transporter family protein (TAIR:AT4G29870.1); Has 214 Blast hits to 214 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 151; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:8374313..8375795 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 21840.70 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.07 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.21 | ||||||||||||||||||||||||||||||||
| Length | 200 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAPRSDSQTG SSVSDGSDQS SMDPIFHLLR IVPFSFLRPP RLRLKIPSFT LPSPMTVYAL ILLTYFLVVS GFVYDVIVEP PGIGSTQDPT TGTIRPVVFM 101: SGRVNGQYII EGLSSGFMFV LGGIGIVMLD LALDKNKAKS VKASYAVAGV SSIVIAYVMS SWRKETTWRE HSRIPRRSKT VDGAVLRHDE PFSLLSIPAS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)