AT2G19050.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : GDSL-like Lipase/Acylhydrolase superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT2G19060.1); Has 3204 Blast hits to 3171 proteins in 126 species: Archae - 0; Bacteria - 159; Metazoa - 0; Fungi - 8; Plants - 3033; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:8253416..8255534 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 38579.20 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.66 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.09 | ||||||||||||||||||||||||||||||||||||||||
| Length | 349 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAEAIFKALL LVIATTAFAT TEAALGQRVP CYFVFGDSVF DNGNNNVLNT SAKVNYSPYG IDFARGPTGR FSNGRNIPDI IAELMRFSDY IPPFTGASPE 101: QAHIGINYAS GGGGIREETS QHLGEIISFK KQIKNHRSMI MTAKVPEEKL NKCLYTINIG SNDYLNNYFM PAPYMTNKKF SFDEYADSLI RSYRSYLKSL 201: YVLGARKVAV FGVSKLGCTP RMIASHGGGN GCAAEVNKAV EPFNKNLKAL VYEFNRDFAD AKFTFVDIFS GQSPFAFFML GFRVTDKSCC TVKPGEELCA 301: TNEPVCPVQR RYVYWDNVHS TEAANMVVAK AAYAGLITSP YSLSWLARL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)