AT2G18560.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.447 endoplasmic reticulum 0.399 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : UDP-Glycosyltransferase superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G18570.1); Has 7338 Blast hits to 7298 proteins in 379 species: Archae - 0; Bacteria - 232; Metazoa - 2143; Fungi - 28; Plants - 4843; Viruses - 28; Other Eukaryotes - 64 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr2:+:8059696..8060838 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 42425.40 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.54 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.10 | ||||||||||||||||||||||||||||||||
| Length | 380 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MREMKSTVRD AVKSMKQKPT VMIVDFFGTA LLSITDVGVT SKYVYIPSHA WFLALIVYLP VLDKVMEGEY VDIKEPMKIP GCKPVGPKEL LDTMLDRSDQ 101: QYRDCVQIGL EIPMSDGVLV NTWGELQGKT LAALREDIDL NRVIKVPVYP IGPIVRTNVL IEKPNSTFEW LDKQEERSVV YVCLGSGGTL SFEQTMELAW 201: GLELSCQSFL WVLRKPPSYL GASSKDDDQV SDGLPEGFLD RTRGVGLVVT QWAPQVEILS HRSIGGFLSH CGWSSVLESL TKGVPIIAWP LYAEQWMNAT 301: LLTEEIGMAI RTSELPSKKV ISREEVASLV KKIVAEEDKE GRKIKTKAEE VRVSSERAWT HGGSSHSSLF EWAKRCGLVS |
||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)