AT2G17470.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.577 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Aluminium activated malate transporter family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Aluminium activated malate transporter family protein; INVOLVED IN: response to aluminum ion; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: Aluminium activated malate transporter family protein (TAIR:AT1G25480.1); Has 1009 Blast hits to 1007 proteins in 362 species: Archae - 0; Bacteria - 626; Metazoa - 0; Fungi - 24; Plants - 336; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:7584572..7588008 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 60699.70 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.44 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.07 | ||||||||||||||||||||||||||||||||||||||||
| Length | 538 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGPFHQQSRE RLLSQNEYSD MCFRKITNLC ELGHSDRRRI FFAVKMGMAL ALCSVVIFLK EPLHDASKYS VWGILTVVVV FEYSVGATLV KGFNRAIGTV 101: SAGGLALGIA RLSVLSRDFE QTIIITCIFL AGFIASYSKL HPAMKPYEYA FRVFLLTFCI VLVSGNNTGD FFSTAYYRFL FIVVGATTCL VVNIFIFPIW 201: AGEDLHKLVA NNFKSVANSL EGCVNGYLQC VEYERVPSKI LTYQTSDDPL YSGYRSAIQS TNQEESLLDF AIWEPPHGPY RTFNHPWKNY VKLSGAVRHC 301: AFTVMAIHGC ILSEIQAAPE KRQAFRHELQ RVGNEGAKVL RLIGEKVEKM ENLGPGEILN DVQRAAEELQ MKIDSKSYLL VNSESWAATK EKAEAEEYEE 401: EAHETKVIKS LSQIWDTNSS SNNQNPASGN DESQIWESTE SMMLRNRETW PSVSFIGGSV VNETVYKVYE SASSLSLATF ASLLIEFVAR LENLVNAFEE 501: LSTKADFRDP VPLNVVDQEG LWTTLMRLRR LRRYFGRS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)