AT2G17170.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.829 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT2G17090.1); Has 20684 Blast hits to 20439 proteins in 426 species: Archae - 2; Bacteria - 159; Metazoa - 1288; Fungi - 17; Plants - 18886; Viruses - 23; Other Eukaryotes - 309 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr2:+:7474736..7476438 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 36908.70 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.78 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.44 | ||||||||||||||||||||||||||||||||
| Length | 328 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGGCCFSTPL DNNQQPPQQP QIPPGERKND GFVNWPVTEF FLSDITTATN NFSSDEIISE NAEESSNVVY KGCLLENLGF VAVKRFKNTP WDDPDYFTED 101: AKTAGELKHK RLVKLLGYCC EEDEGLLVAE FMPNDTLAKR LFQEKNMEWS MRLRVAYHIV EALDYCNSVR FDEYDNLSAY TVLFDKDGDA CLSSFGLVKE 201: IIRYNRREGG NVRTGNVTYR FGTILVNLLT GLQISPSHAP EMINGKDVTE LMDPNLKGKF STEEATIVLK LASECLQWKG YIENGITKKL VATLKALQAK 301: KEISSSEMHE VTKQHDVASS SSQQQLPP |
||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)