AT2G16490.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:cytosol 0.997 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : XH domain-containing protein | ||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
XH domain-containing protein; CONTAINS InterPro DOMAIN/s: Domain of unknown function XH (InterPro:IPR005379); BEST Arabidopsis thaliana protein match is: XH/XS domain-containing protein (TAIR:AT1G15910.1); Has 169 Blast hits to 163 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 169; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr2:-:7146000..7147296 | ||||||||||||||||||||
Molecular Weight (calculated) | 21137.10 Da | ||||||||||||||||||||
IEP (calculated) | 10.09 | ||||||||||||||||||||
GRAVY (calculated) | -0.41 | ||||||||||||||||||||
Length | 179 amino acids | ||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MEIQELKGKF QVIKHLGDDD DNILKMKLWL KLPSFALHRR RISRIHHGIH SNIKEPRTNQ ICVFPAVSSH FKSDLVNEEY EPLKKLKEKW GEDVHNTLKI 101: TIKDMDEYNA CGKYPTPELW NFKKKLKSTL KEVIKFLLND IKSLKRQRIC RCVISFLVDI GLLIDLNQHK PHIVLVYKV |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)