AT2G15730.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.723 What is SUBAcon? |
|
||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G34420.1); Has 149 Blast hits to 147 proteins in 26 species: Archae - 0; Bacteria - 31; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr2:+:6849797..6851881 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 39806.20 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 9.37 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.31 | ||||||||||||||||||||||||||||
| Length | 344 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGDEHSLIPK DSFVFKLPKK SPLVLRTVVL LFVMVCTVYI CSICLKQIGV VPSAGFLNVE VFERPCPEPN IQPWDIPYVH YPKPKTYSRE ECSCNPVRYF 101: AILSMQRSGS GWFETLLNNH TNISSNGEIF SVKDRRANVS TIFETLDKVY NLDWLSSASK NECTSAVGLK WMLNQGLMKN HEEIVEYFKT RGVSAIFLFR 201: RNLLRRMISV LANSYDRDAK PLNGTHKSHV HSPKEAEILA RYKPLINTSL LIPDLKQVQE MTSKALAYFN TTRHIFLYYE DVVKNRTKLD DVQEFLKVPK 301: LDLKSRQVKI HHGPLSQHVQ NWEEVQKTLK GTGFENFLLE DYRR |
||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)