AT2G15420.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.997 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : myosin heavy chain-related | ||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
myosin heavy chain-related; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT3G42060.1); Has 224 Blast hits to 220 proteins in 69 species: Archae - 7; Bacteria - 19; Metazoa - 62; Fungi - 12; Plants - 83; Viruses - 6; Other Eukaryotes - 35 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:6723948..6728183 | ||||||||||||||||||||
| Molecular Weight (calculated) | 104579.00 Da | ||||||||||||||||||||
| IEP (calculated) | 4.74 | ||||||||||||||||||||
| GRAVY (calculated) | -0.43 | ||||||||||||||||||||
| Length | 957 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPVRREQQVF LLFTRKALCF KIGVSFLQTL AVGFVLRKGE PPNMAAERTG ELEFGLEEVV VPERAEEAPT VGISPINREA VGELGGHIAR HNGFGEGEVA 101: RTEFGPSCET VERSRGEFDV RFLAGELVDG DGDELVGVAG ENGIVGEELG VCSNGGELSG GDGEINGERE ELGGEREGLV GCEGEIGVRR VDVAVRPSGE 201: TSRERPNGDV LEPSVHETRR ERDKCGNNGQ GELSKMGDPL QRDVLGASRV ASAPSPARFG KGKNLDAILN AEFGGFDPMD DRDFGGFNDF GEEVSYVYDC 301: ENVDEDYISD PEGELGENGG LGRLMMENGF DNLVVSGRDT GARGAVGTRP VSRIEERRTG DCSAVRGRQI VLGLRASYFE RVVAPLDHGS SLCDDQSLAD 401: MLILCNAPRE IELLKPDSLQ RPWTPPEGYI CLYEAYFTRC GLLFPLPNFL TEYCARRNIA ISQLTVGAIR NAIGLAILGA ECGIEIDTDF FEEATTFSRV 501: KESPGSYYAS AKAKHKIVSG AVSKIHGWKR RYFFVKLSEF SVENLDTVFV DDWTMSPEPV FRVRDFPPGF LDNIARIREL GALHWPTGSF PETRQTRPRM 601: GKIIPQLPRF VDEFGENPDL MNGVEPSPVV TEARLDVENR GDESLGRGSA TESATGDVVV DRSEKRPVAE DKGTDGDVVH RSALPSLGGS TPSKKRTSRD 701: DAEKGSFKVP KTPRRETTVR GAVDHGFSYQ YKAKDIAFTQ NATSCADLVS RIRGASDDFS SVDRFVEREL FKDWAQKTCQ SIGAGNRLSS FLGCKAKVSA 801: TRLATESAEC EALQKLAKEL AVERERSATL EKRSSELFEQ VSSLQSSVDE TRMQLEALDK RFASEGARLR KSRIEHVAAE RKKSDSQVTG TLQCLEKLVK 901: KKVAIPPATI RELEVRERTL DNGVRQLEVA DLLPGDLDPF EEVEAGAVGA ALVSGIS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)