AT2G15340.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : glycine-rich protein | ||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
glycine-rich protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G15770.1); Has 1269 Blast hits to 657 proteins in 153 species: Archae - 2; Bacteria - 307; Metazoa - 382; Fungi - 208; Plants - 187; Viruses - 2; Other Eukaryotes - 181 (source: NCBI BLink). | ||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:6677339..6677698 | ||||||||||||||||
| Molecular Weight (calculated) | 12141.00 Da | ||||||||||||||||
| IEP (calculated) | 7.35 | ||||||||||||||||
| GRAVY (calculated) | -0.10 | ||||||||||||||||
| Length | 119 amino acids | ||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MALSGSQKKV FLLVIAIACL SSSLAEAWSW SSSDGNGWGW GSDGSSTSTS GPGSTPGDSN SGGSNPGGPN SGGFSSPWGS WGWGWGSHGS GSPAPSNALF 101: LLVIIKKKNL SDFLFYYIM |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)