AT2G14060.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.915 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
encodes a protein whose sequence is similar to SAM:salicylic acid carboxyl methyltransferase (SAMT) (GI:6002712)(Clarkia breweri) and to SAM:benzoic acid carboxyl methyltransferase (BAMT)(GI:9789277)(Antirrhinum majus) | ||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT5G38020.1); Has 863 Blast hits to 850 proteins in 119 species: Archae - 0; Bacteria - 61; Metazoa - 5; Fungi - 5; Plants - 725; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:5914514..5915767 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 41372.50 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.88 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.28 | ||||||||||||||||||||||||||||||||
| Length | 359 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKGGTGDHSY ATNSHYQRSV FYEIQPLVIE NVREMLLKNG FPGCIKVADL GCSTGQNTVL AMSAIAYTIM ESYQQMSKNP PEIDCYLNDL PENDFNTTFK 101: LFHSFQEKLK PEVKGKWFVS GVPGSFYSRL FPRKSLHFVH SAFSIHWLSR IPDGLESNTK SIHIKYPYPS NVYKSYLNQF KIDFSLFLKM RSEEVVHNGH 201: MVLTFVGRKV SDTLSKDCFQ VWSLLSDCLL DLASEGFVND SMVKSFNMPF YNPNEEEVRE FILKEGSFEI TKIEKFDHVV PYKIDREEED EEQSLQLEAG 301: IKHASWARCI TEPLLVAHFG DAIIEPVFNK YAHYMAKYLS VSNHRRNMTL VIVVSLTRK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)