AT2G13720.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : DNA topoisomerase (ATP-hydrolyzing)s;ATP binding;DNA binding | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
DNA topoisomerase (ATP-hydrolyzing)s;ATP binding;DNA binding; FUNCTIONS IN: DNA topoisomerase (ATP-hydrolyzing) activity, DNA binding, ATP binding; INVOLVED IN: DNA topological change; LOCATED IN: chromosome; CONTAINS InterPro DOMAIN/s: DNA topoisomerase, type IIA, central (InterPro:IPR013760); BEST Arabidopsis thaliana protein match is: topoisomerase II (TAIR:AT3G23890.1); Has 508 Blast hits to 508 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 78; Fungi - 205; Plants - 50; Viruses - 12; Other Eukaryotes - 163 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:5724039..5725248 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 26524.60 Da | ||||||||||||||||||||||||
| IEP (calculated) | 10.94 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.53 | ||||||||||||||||||||||||
| Length | 223 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MWALVAQAER LGSMRCRASR MPRGREWPRV RVPRDGLKSS FITVLVTPYV KVSRLTFSSH KYFIVLTNLS YVTSTLNTRN GKMKDRNYLN RWTIKFYKGV 101: WVQVMREKNV LSNVDQNKRF FIWDEGSEAA LENAFGTSED KQKKWIEKYV PGTFLDSKKQ QIMYSDFVTK KLKLYFTTSN QRKHININKK NYILKKNDKK 201: SKKIILKKYE KKVIQYIIIV LLI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)