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AT2G13500.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.959
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41590.1); Has 126 Blast hits to 126 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 126; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AC007063EMBL:CP002685EnsemblPlants:AT2G13500EnsemblPlants:AT2G13500.1
entrez:815836GeneID:815836Gramene:AT2G13500.1hmmpanther:PTHR31286
hmmpanther:PTHR31286:SF1HOGENOM:HOG000114065InterPro:IPR025558InterPro:IPR025836
KEGG:ath:AT2G13500OMA:IALARWHPfam:PF14111Pfam:PF14392
PhylomeDB:Q9SIU4PIR:A84508Proteomes:UP000006548RefSeq:NP_178976.1
TAIR:AT2G13500UniGene:At.52724UniProt:Q9SIU4
Coordinates (TAIR10) chr2:+:5627936..5629099
Molecular Weight (calculated) 39631.50 Da
IEP (calculated) 9.60
GRAVY (calculated) -0.40
Length 338 amino acids
Sequence (TAIR10)
(BLAST)
001: MVDVLWDEIQ NLELGQDYPT LFIPNEAYVM VEDRNRLSLI ARPLLPRVQN FNAVINALPR AWGLTAHVHG RILDATYVQL LFQTEIYLLS VQRREVWLFN
101: NWFVASQRWE AAPSLNFVTT IDLWVQMRGI PILYVFEKTE LEIAQELGEI ISLDFHDATS TQIAYIRVRV RFGITDRLRF FQRITFESGE TALIRFQYER
201: LRRIYSCFRF THNLNYYPYR QRFQSIDRER AVFRDSVLRS SFNSQSQMTD SSLQVPLHPP PRVPSSGDAI TSGIMRVFEV GESSRGVQDG ESHNNMNLGE
301: SSKRKNLVIL QRDKESRQHK QQETEQRMGG ILKPPKKR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)