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AT2G11270.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : citrate synthase-related
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
citrate synthase-related; FUNCTIONS IN: transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer; INVOLVED IN: cellular carbohydrate metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Citrate synthase-like (InterPro:IPR002020); BEST Arabidopsis thaliana protein match is: citrate synthase 5 (TAIR:AT3G60100.1); Has 139 Blast hits to 139 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 69; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0372eggNOG:KOG2617EMBL:AC006136EMBL:AC006419
EMBL:CP002685EnsemblPlants:AT2G11270EnsemblPlants:AT2G11270.1entrez:815597
GeneID:815597GO:GO:0046912Gramene:AT2G11270.1hmmpanther:PTHR11739
InterPro:IPR002020KEGG:ath:AT2G11270PANTHER:PTHR11739ProMEX:Q8RV72
Proteomes:UP000006548RefSeq:NP_178890.1SMR:Q8RV72STRING:3702.AT2G11270.1
TAIR:AT2G11270UniGene:At.52710UniProt:Q8RV72
Coordinates (TAIR10) chr2:+:4484720..4485308
Molecular Weight (calculated) 9575.88 Da
IEP (calculated) 11.92
GRAVY (calculated) -0.20
Length 83 amino acids
Sequence (TAIR10)
(BLAST)
1: MVFRHLIIPF NLNNNRGRFH VVIKLFSLYS RETSYTNTTF NFQDRSKKLK LKHGKVPVGN ITVDMVLGGM RGMTGLHNRN LIA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)