AT2G10440.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.994 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15780.1); Has 1628 Blast hits to 1350 proteins in 149 species: Archae - 0; Bacteria - 39; Metazoa - 480; Fungi - 159; Plants - 187; Viruses - 2; Other Eukaryotes - 761 (source: NCBI BLink). | ||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:4013752..4018046 | ||||||||
| Molecular Weight (calculated) | 95021.40 Da | ||||||||
| IEP (calculated) | 8.87 | ||||||||
| GRAVY (calculated) | -0.60 | ||||||||
| Length | 845 amino acids | ||||||||
| Sequence (TAIR10) (BLAST) |
001: MEGNTNWKPN EQGGNRDAAN NRIDWRSQHE PELRQKVLSK IVCSLNDYRK VEKFKEKFHA HEEYKINDIA SKFEENFYSI ATDKNDYLRK LSETLHYIQR 101: TYTRVLASQV VVNQAQSLPA LLPYMQTTTS QQWLQQNTQS NLCVICFAKS GPYNRSRFSK TDTCSVTAAA TSSAKFVETT YSTAFSSIKL TKHSITDQKS 201: VFDTTVLIMN IIVASQDSTG KTVNVNAGNW QEETYQKIKK LKEMCLPVLS LMHQRVAEKL RETESLPPQP MQAQWIEKLK AGKLSMEHLM FFLNVHRSSV 301: SEKHRDKFSQ YEYHILKFTK SQTMVLRPTQ QQQGQFPPSQ TAMQTQSPQV HVSQSLYKEQ RRSRLMPSSQ NEASSLLQIR PKLDPRDENI IMASSGNVML 401: PSVKQNPRAV NTNISSVQSL QKQKRFHHRQ MQQQQPQQGN HQHQMQTNEM NDVRMRERVN IKARLLEQQV SSSQRQVPKQ ESNVSSSQIQ NHSSPQLVDQ 501: HILPATINKT GTPLNSSGSA FVAPAPSPVP GDSEMPISVE SPVSGVDEIN STLDSSSKLG TQETPLLFVP PPEPITERPI DRLIKAFQAA SPKSLAESVS 601: EISSVISMVD MIGGSFPSSG GSRAGLGEDL SERTRNFTTH EETNLSKRMK RSINIVPPDM SSQIDSYEQL SSLESEVVST TSSGLKVNNI APGYALLQEI 701: KETNGRLVET VVEICDEDSL GTIVTCTYAP VALSATFKDH YKSGKIAQIQ PLRLLFPMDY PYSSPIVLEE ISFDTSVHKY EDLSARTRSR FSLSMKEFSE 801: PGFSKGIAQT WNDCARATMV EYAERHGGGT FSSKYGAWET VLRAS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)