AT2G07340.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:cytosol 0.953 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : PREFOLDIN 1 | ||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
PREFOLDIN 1 (PFD1); FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding; LOCATED IN: prefoldin complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin beta-like (InterPro:IPR002777), Prefoldin (InterPro:IPR009053); Has 311 Blast hits to 311 proteins in 149 species: Archae - 25; Bacteria - 0; Metazoa - 139; Fungi - 66; Plants - 52; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr2:+:3045644..3046606 | ||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 14605.50 Da | ||||||||||||||||||||||||||||||||||||
IEP (calculated) | 4.62 | ||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.68 | ||||||||||||||||||||||||||||||||||||
Length | 128 amino acids | ||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MADEATRAAF MEIQASMIEL TGKLKQVQNQ MRNKEGDRKR AFLTLEELRP LPEETNTYKS IGRTFVLEPK TVLEGEQEQK LKDSEAAVAS LQTSKEYLEK 101: QVAEVENNLR ELLQQEPGIA QQIMSMSM |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)