AT2G07240.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.649 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cysteine-type peptidases;cysteine-type peptidases | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
cysteine-type peptidases;cysteine-type peptidases; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1985 (InterPro:IPR015410), Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:3007102..3011701 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 94607.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.90 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.32 | ||||||||||||||||||||||||||||||||
| Length | 874 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLKKRVVTDR EIRLRYACLA LVDGFLLPTS HYPKIIKDHA EMSEDLQGFL SYPWGRLSFE MMMTSIKERE VEQLATTCVA VQGLLYALQL VVLEAVPAIQ 101: EGPQIDEVVL SDSDAEAAAD VATRPGVALK LGNAKNVDSN CEAHVEPIIF PNARLNPVED LTWSDDEDGE RVDNMTGGKT KVVRGMKAQS NARPATGMRR 201: KNHGPIGEKG ESSSGVYFDA LSRMIDEKLK AQSEKILKGV IHWFTENLVV DPDNPKADKE AADGDHGPHT DKEVALGDNG LQADKETGGE EQNSNPVSSP 301: ESANEYEESD FNPIPPPRQP SSMQTDFTLP SFQGDQAISA VDDVVSFYNS VNVPTDPSGG ASNTNKTNKV QSGEEEVGVQ PEKNGNQQAD VDMVDDLNAG 401: RAHQADVEMV DDINAAMAEQ DVNMPSDGVA HPSSSTVSPP KSVTTENTAL GPDVAPDPLN PVAPLDPLPS VVVVATSVVA PNPPEESQDF AMFSSQIGSS 501: QPTHPSALPT QALKTASSPI TKLNDTPKVD NVSSVGASLI PNLPVTIVQR FFNPPPPSGG KLLAGKDGGG PDGDVNQGRK SKRPRTLSSK LDGRFHFDKK 601: TKLLVGHPSP FLSVGELASD PEVRYQRSLS KIKGKSSISI VGEASLSHKE IFDIIERKKH FSSKVMDVLI KFSRHLLRTD DIDGEKLRVD VLGSKFVSQL 701: TRLFPKFAKT LPPKDFIFPS ALVDLLIGAG ESNRVRLFAE ADCVYMPFNF DKKHWVSLCV DLKAHKITIL DSNIQLRRDA ALYAELQPLA AMLPYLFRQT 801: SSSSGDISLQ PFLLDRPHGI PQVSSPFDSG VLSVFLIHAH AVGGVEECME FDVVALDVEV KKLVSTIILS GVAS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)