AT2G07020.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.810 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase protein with adenine nucleotide alpha hydrolases-like domain | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: pollen tube growth; EXPRESSED IN: pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT5G35380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:2908473..2911198 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 78139.50 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.58 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.37 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 700 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVKMVDGERR DESVAIAIDR DKGSQAALKW AVDNLLTPGE TLTLIHVKVK QTLANNGTQP NKSGDDVKEL FLPFRCFCTR KDINCEEVVL ENVDAAEGII 101: EYVQENAIDI LVLGASKITL LKRLKAVDVT NAVIKGAPNF CTVYAISKGK ISSVRSATSS PPPLCTIRPQ LPARSSNANN NNFSPRAQRR LQSVQSIQDE 201: IEIKSPYLRK EYDQGTYQAL VSDSDLSFVS SDRPSMDWFE DNRSNYATSS SSSEKQSIDL CSSYSAFSTS SQESGRLSSL SMYSQDDVES EMRRLKLELK 301: YTMDMYNSAC KEAIAAKKTT IELHKWKEER KHKLEEAILA KEAAMAIAEN EKAKSRAAME ALEAAHRMAE TEAQKRKQIE TAALREVEHE NKAMHALPHS 401: NRMYRKYTIE EIEQGTTKFS DSHKIGEGSY GTVYKGTLDY TPVAIKVVRP DATQGRSQFQ QEVEVLTCIR HPNMVLLLGA CAEYGCLVYE YMSNGSLDDC 501: LLRRGNSPVL SWQLRFRIAA EIATSLNFLH QLKPEPLVHR DLKPANILLD QHMVSKISDV GLARLVPPTI DDIATHYRMT STAGTLCYID PEYQQTGMLG 601: TKSDIYSFGI VLLQILTAKT PMGLTNQVEK AIEEGNFAKI LDPLVTDWPI EEALILAKIG LQCAELRRKD RPDLGTVVLP GLKRLMNLAE ENMSITRPSS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)