AT2G05320.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.723 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : beta-1,2-N-acetylglucosaminyltransferase II | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
beta-1,2-N-acetylglucosaminyltransferase II; FUNCTIONS IN: acetylglucosaminyltransferase activity, alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity; INVOLVED IN: oligosaccharide biosynthetic process; LOCATED IN: Golgi stack, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: N-acetylglucosaminyltransferase II (InterPro:IPR007754); Has 211 Blast hits to 180 proteins in 71 species: Archae - 0; Bacteria - 0; Metazoa - 183; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:1936016..1937308 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 48949.20 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.96 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.42 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 430 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MANLWKKQRL RDTGLCRLGI LFAVTLSIVL MLVSVPRTAL NGSSIDDDLD GLDKDLEAKL NASLLSVARG NRMSLRLHRR NHFSPRNTDL FPDLAKDRVV 101: IVLYVHNRAQ YFRVTVESLS KVKGISETLL IVSHDGYFEE MNRIVESIKF CQVKQIFSPY SPHIYRTSFP GVTLNDCKNK GDEAKGHCEG NPDQYGNHRS 201: PKIVSLKHHW WWMMNTVWDG LEETKGHEGH ILFIEEDHFL FPNAYRNIQT LTRLKPAKCP DCFAANLAPS DVKSRGEGLE SLVAERMGNV GYSFNRSVWE 301: NIHQKAREFC FFDDYNWDIT MWATVFPSFG SPVYTLRGPR TSAVHFGKCG LHQGRGDEGD CIDNGVVNIE VKETDKVVNI KEGWGVRVYK HQAGYKAGFE 401: GWGGWGDDRD RHLCLDFATM YRYSSSSASP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)