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AT2G04038.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : basic leucine-zipper 48
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
basic leucine-zipper 48 (bZIP48); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: male gametophyte, root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 58 (TAIR:AT1G13600.1); Has 2088 Blast hits to 2086 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 100; Fungi - 38; Plants - 1848; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JX2KeggNOG:ENOG41104CSEMBL:AB493545EMBL:AC007178
EMBL:CP002685EnsemblPlants:AT2G04038EnsemblPlants:AT2G04038.1entrez:814936
GeneID:814936GO:GO:0003700GO:GO:0043565Gramene:AT2G04038.1
hmmpanther:PTHR22952hmmpanther:PTHR22952:SF110HOGENOM:HOG000238858IntAct:Q8RU59
InterPro:IPR004827KEGG:ath:AT2G04038OMA:FPREFEDPfam:PF00170
Pfscan:PS50217PhylomeDB:Q8RU59PROSITE:PS00036PROSITE:PS50217
Proteomes:UP000006548RefSeq:NP_178489.1scanprosite:PS00036SMART:SM00338
SMR:Q8RU59STRING:3702.AT2G04038.1SUPFAM:SSF57959TAIR:AT2G04038
tair10-symbols:AtbZIP48tair10-symbols:bZIP48UniGene:At.52627UniProt:Q8RU59
Coordinates (TAIR10) chr2:+:1331919..1332419
Molecular Weight (calculated) 19502.70 Da
IEP (calculated) 6.78
GRAVY (calculated) -1.04
Length 166 amino acids
Sequence (TAIR10)
(BLAST)
001: MIPAEINGYF QYLSPEYNVI NMPSSPTSSL NYLNDLIINN NNYSSSSNSQ DLMISNNSTS DEDHHQSIMV LDERKQRRML SNRESARRSR MRKQRHLDEL
101: WSQVIRLRNE NNCLIDKLNR VSETQNCVLK ENSKLKEEAS DLRQLVCELK SNKNNNNSFP REFEDN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)