AT2G03810.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.994 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : 18S pre-ribosomal assembly protein gar2-related | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
18S pre-ribosomal assembly protein gar2-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: cotyledon; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13650.1); Has 7945 Blast hits to 4358 proteins in 575 species: Archae - 23; Bacteria - 2851; Metazoa - 1872; Fungi - 665; Plants - 238; Viruses - 54; Other Eukaryotes - 2242 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:1162703..1164286 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 49068.20 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 4.26 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -1.05 | ||||||||||||||||||||||||||||
| Length | 439 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRADNDHALG NSIEICKDES KPHQCLDENW EDAELKVPEN GKNNNNVCEL FYDTRSGEEW ENEAGKKVRD TSHDCDANVD SPEKKDPVFY MDKNVTACDL 101: PEIVVCYKEN TYHIVKDICV DEGVPVQEKF LFGEKDSVKS SSTEDLMKAD KTNVNPSETK SAEDSISKVD DSEFCNDHKT DRDVEESSGE DFADAEGTSS 201: NYNQEHLIVT EEVKASPTHG LSPSEIEPDE NSKDEVAISQ DNDSKECLTL GDILSREDEQ KSLNQDNISS DSHEEQSPSQ LQDKEKRSLE TTAIETELEK 301: TEEPKQGEEK LSSVSTTTSQ EPNKTCNEPE KPETENHHQQ NCLVENSYED DKFSSSRFGE TSFSAADSVS ISGHITYSGP IAYSGSLSVR SDASTTSGRS 401: FAFPILQSEW NSSPVRMAKA DKRRQKGGWR HTLLCCRFS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)