AT2G03280.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.443 vacuole 0.211 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : O-fucosyltransferase family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
O-fucosyltransferase family protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT1G14020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:996249..998239 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 58870.70 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.86 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.22 | ||||||||||||||||||||||||||||||||
| Length | 508 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSVVVGDRSE STLMRSDYKA PPSQAIPKAR LQVWFFRVCS CILVWTCLIQ LFWHSQIFTG LTNHISRFSL PVQSVPLPPP LPPRNYTSNG ILLVSCNGGL 101: NQMRAAICDM VTVARLLNLT LVVPELDKKS FWADTRYMFV SHVNDPTRFV CSLKHSFVSS FYSDFEDIFD IKHFIDSLRD EVRIIRRLPK RYSKKYGFKL 201: FEMPPVSWSN DKYYLQQVLP RFSKRKVIHF VRSDTRLANN GLSLDLQRLR CRVNFQGLRF TPRIEALGSK LVRILQQRGS FVALHLRYEM DMLAFSGCTH 301: GCTDEEAEEL KKMRYAYPWW REKEIVSEER RVQGLCPLTP EEAVLVLKAL GFQKDTQIYI AAGEIFGGAK RLALLKESFP RIVKKEMLLD PTELQQFQNH 401: SSQMAALDFI VSVASNTFIP TYYGNMAKVV EGHRRYLGFK KTILLDRKRL VELLDLHNNK TLSWDQFAVA VKDAHQGRRM GEPTHRKVIS VRPKEEDYFY 501: ANPQECIS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)