AT2G02860.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : sucrose transporter 2 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
encodes a sucrose transporter in sieve elements and a number of sink tissues and cell types. Gene expression is induced by wounding. | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
sucrose transporter 2 (SUT2); CONTAINS InterPro DOMAIN/s: Sucrose/H+ symporter, plant (InterPro:IPR005989), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sucrose-proton symporter 2 (TAIR:AT1G22710.1); Has 2242 Blast hits to 2047 proteins in 559 species: Archae - 40; Bacteria - 808; Metazoa - 438; Fungi - 240; Plants - 408; Viruses - 0; Other Eukaryotes - 308 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:828546..832296 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 63976.10 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.78 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.32 | ||||||||||||||||||||||||||||||||||||||||
| Length | 594 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSDSVSISVP YRNLRKEIEL ETVTKHRQNE SGSSSFSESA SPSNHSDSAD GESVSKNCSL VTLVLSCTVA AGVQFGWALQ LSLLTPYIQT LGISHAFSSF 101: IWLCGPITGL VVQPFVGIWS DKCTSKYGRR RPFILVGSFM ISIAVIIIGF SADIGYLLGD SKEHCSTFKG TRTRAAVVFI IGFWLLDLAN NTVQGPARAL 201: LADLSGPDQR NTANAVFCLW MAIGNILGFS AGASGKWQEW FPFLTSRACC AACGNLKAAF LLAVVFLTIC TLVTIYFAKE IPFTSNKPTR IQDSAPLLDD 301: LQSKGLEHSK LNNGTANGIK YERVERDTDE QFGNSENEHQ DETYVDGPGS VLVNLLTSLR HLPPAMHSVL IVMALTWLSW FPFFLFDTDW MGREVYHGDP 401: TGDSLHMELY DQGVREGALG LLLNSVVLGI SSFLIEPMCQ RMGARVVWAL SNFTVFACMA GTAVISLMSL SDDKNGIEYI MRGNETTRTA AVIVFALLGF 501: PLAITYSVPF SVTAEVTADS GGGQGLAIGV LNLAIVIPQM IVSLGAGPWD QLFGGGNLPA FVLASVAAFA AGVIALQRLP TLSSSFKSTG FHIG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)