AT2G02061.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.987 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Nucleotide-diphospho-sugar transferase family protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Nucleotide-diphospho-sugar transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, stem, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferase family protein (TAIR:AT1G14590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:498025..499559 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 46652.20 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 7.43 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.32 | ||||||||||||||||||||||||||||
| Length | 408 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNLSNRFGSN SKTAILNDSY SDENHSSSAA AAVTSVVIPP CSGNVLRAVL LLFFICFCFS LYRTSGYLRI VSDSSSTLSR IFPSVNDSSS SPSPSPSLSP 101: EEIEEPKLEE VLRRAATKDG TVILTTLNEA WAAPGSVIDL FFESFRIGKG TRRLLKHLVI IALDAKAYSR CQELHKHCFR LETEGVDFSG GEAYFMTPSY 201: LTMMWRRISF LRSVLEKGYN FVFTDADVMW FRNPFRRFYE DGDFQIACDH YIGRPNDFRN RPNGGFTFVR ANNRSIGFYK FWYDSRTKYP KNHDQDVLNF 301: IKTDPFLWKL RIRIRFLNTV YFGGFCEPSK DLNLVCTMHA NCCFGLDSKL HDLRIMLQDW RDFKSLPLHS NQSSGFTWSV PQNCSLDSLR PVDSKDEEES 401: EPPGESTQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)