AT2G01690.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.748 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ARM repeat superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), Protein of unknown function DUF3434 (InterPro:IPR021841), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:309144..313499 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 84044.50 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.01 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.20 | ||||||||||||||||||||||||||||||||||||||||
| Length | 744 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSDALSAIPA AVHRNLSDKL YEKRKNAALE LENIVKNLTS SGDHDKISKV IEMLIKEFAK SPQANHRKGG LIGLAAVTVG LSTEAAQYLE QIVPPVINSF 101: SDQDSRVRYY ACEALYNIAK VVRGDFIIFF NKIFDALCKL SADSDANVQS AAHLLDRLVK QDIVTESDQF SIEEFIPLLK ERMNVLNPYV RQFLVGWITV 201: LDSVPDIDML GFLPDFLDGL FNMLSDSSHE IRQQADSALS EFLQEIKNSP SVDYGRMAEI LVQRAASPDE FTRLTAITWI NEFVKLGGDQ LVRYYADILG 301: AILPCISDKE EKIRVVARET NEELRSIHVE PSDGFDVGAI LSVARRQLSS EFEATRIEAL NWISTLLNKH RTEVLCFLND IFDTLLKALS DSSDDVVLLV 401: LEVHAGVAKD PQHFRQLIVF LVHNFRADNS LLERRGALIV RRMCVLLDAE RVYRELSTIL EGEDNLDFAS TMVQALNLIL LTSPELSKLR ELLKGSLVNR 501: EGKELFVALY TSWCHSPMAI ISLCLLAQAY QHASVVIQSL VEEDINVKFL VQLDKLIRLL ETPIFTYLRL QLLEPGRYTW LLKTLYGLLM LLPQQSAAFK 601: ILRTRLKTVP TYSFSTGNQI GRATSGVPFS QYKHQNEDGD LEDDNINSSH QGINFAVRLQ QFENVQNLHR GQARTRVNYS YHSSSSSTSK EVRRSEEQQQ 701: QQQQQQQQQQ QQQRPPPSST SSSVADNNRP PSRTSRKGPG QLQL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)