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AT1G80920.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Chaperone DnaJ-domain superfamily protein
Curator
Summary (TAIR10)
A nuclear encoded soluble protein found in the chloroplast stroma.
Computational
Description (TAIR10)
J8; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding, response to stress; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT3G05345.1); Has 10939 Blast hits to 10938 proteins in 2525 species: Archae - 126; Bacteria - 6057; Metazoa - 1338; Fungi - 591; Plants - 814; Viruses - 3; Other Eukaryotes - 2010 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0484eggNOG:KOG0715EMBL:AC011713EMBL:AF099906
EMBL:AF332461EMBL:AY040017EMBL:AY079369EMBL:AY088122
EMBL:CP002684EnsemblPlants:AT1G80920EnsemblPlants:AT1G80920.1entrez:844432
Gene3D:1.10.287.110GeneID:844432Genevisible:Q9SAG8GO:GO:0005634
GO:GO:0009416GO:GO:0009507GO:GO:0009570Gramene:AT1G80920.1
hmmpanther:PTHR24078hmmpanther:PTHR24078:SF255HOGENOM:HOG000029858InParanoid:Q9SAG8
InterPro:IPR001623KEGG:ath:AT1G80920OMA:VQFHQINPaxDb:Q9SAG8
Pfam:PF00226Pfam:Q9SAG8Pfscan:PS50076PhylomeDB:Q9SAG8
PIR:B96842PIR:T51864PRINTS:PR00625PRO:PR:Q9SAG8
PROSITE:PS50076ProteinModelPortal:Q9SAG8Proteomes:UP000006548RefSeq:NP_178207.1
SMART:SM00271SMR:Q9SAG8STRING:3702.AT1G80920.1SUPFAM:SSF46565
TAIR:AT1G80920tair10-symbols:J8UniGene:At.21479UniGene:At.25189
UniProt:Q9SAG8
Coordinates (TAIR10) chr1:-:30403863..30404549
Molecular Weight (calculated) 18326.40 Da
IEP (calculated) 6.51
GRAVY (calculated) -0.73
Length 163 amino acids
Sequence (TAIR10)
(BLAST)
001: MTIALTIGGN GFSGLPGSSF SSSSSSFRLK NSRRKNTKML NRSKVVCSSS SSVMDPYKTL KIRPDSSEYE VKKAFRQLAK KYHPDVCRGS NCGVQFQTIN
101: EAYDIVLKQI KNQMEGTEEF EPFDVYDEGL NGMNDPDCDT WEEWMGWEGA GTRDYSSHVN PYA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)